Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs72939939 | chr6:110793735 | A/G | 0 | 287 | 25.65 | 26.28 | 8.6 | KM Plot |
| KIRP | rs72981675 | chr11:102721251 | C/T | 8.53E-6 | 287 | 25.82 | 26.52 | 10.97 | KM Plot |
| KIRP | rs72981680 | chr11:102721859 | C/A | 8.11E-6 | 288 | 25.7 | 26.52 | 10.97 | KM Plot |
| KIRP | rs72981683 | chr11:102722614 | G/A | 8.84E-6 | 286 | 25.7 | 27.13 | 10.97 | KM Plot |
| KIRP | rs72981684 | chr11:102724211 | C/T | 8.11E-6 | 288 | 25.7 | 26.52 | 10.97 | KM Plot |
| KIRP | rs72981698 | chr11:102726540 | C/T | 8.11E-6 | 288 | 25.7 | 26.52 | 10.97 | KM Plot |
| KIRP | rs72983508 | chr11:102727409 | C/A | 8.11E-6 | 288 | 25.7 | 26.52 | 10.97 | KM Plot |
| KIRP | rs72983513 | chr11:102728985 | T/C | 8.11E-6 | 288 | 25.7 | 26.52 | 10.97 | KM Plot |
| KIRP | rs7300276 | chr12:49900294 | A/G | 5.89E-6 | 282 | 25.82 | 34.97 | 10.97 | KM Plot |
| KIRP | rs730081 | chr19:33310052 | G/A | 1.74E-6 | 280 | 26 | 24.8 | 8.07 | KM Plot |
| KIRP | rs7301723 | chr12:49918243 | C/T | 5.63E-6 | 283 | 25.7 | 34.97 | 10.97 | KM Plot |
| KIRP | rs73031641 | chr11:123521948 | C/T | 0.000135 | 286 | 25.6 | 29.38 | 2.07 | KM Plot |
| KIRP | rs73031642 | chr11:123522212 | T/C | 0.000139 | 285 | 25.62 | 29.38 | 2.07 | KM Plot |
| KIRP | rs73031645 | chr11:123522307 | G/A | 0.000135 | 286 | 25.6 | 29.38 | 2.07 | KM Plot |
| KIRP | rs73031648 | chr11:123522545 | G/C | 0.000135 | 287 | 25.58 | 29.38 | 2.07 | KM Plot |